Parameter: split_pepXML

Overview

When used in conjuction with export_pepXML, produces three separate PepXML output files specific to single, loop-link, and cross-linked peptide spectrum matches. This is so that the different match types can be validated independently and later combined with iProphet. Note that the normal PepXML output file with all results pre-combined is still produced and exported.

Syntax

[Number]

Version

2.1.0 - present

Example

split_pepxml = 1